BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B03SP1|AL427569
(1052 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig742 1578 0.0
>3x_Contig742
Length = 2433
Score = 1578 bits (794), Expect = 0.0
Identities = 827/834 (99%), Gaps = 4/834 (0%)
Strand = Plus / Plus
Query: 1 gatcttcttacctctgttctttctttgttttctttgttgtctggaggccttttcgacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 gatcttcttacctctgttctttctttgttttctttgttgtctggaggccttttcgacctt 1630
Query: 61 ttcagccaaaccgtatytdattaatctgtaagctggttcgaacttcttggcgtcag-aac 119
|||||||||||||||| | | ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1631 ttcagccaaaccgtatctgactaatctgtaagctggttcgaacttcttggcgtcagcaac 1690
Query: 120 agagttgtagaccaaaccaaaaccagtggatttaccaccaccgtattgggttctgaaacc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 agagttgtagaccaaaccaaaaccagtggatttaccaccaccgtattgggttctgaaacc 1750
Query: 180 gaagacggaaacagcgtccttttcagccttgtaagcttcagccaacttttcacgcaattc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 gaagacggaaacagcgtccttttcagccttgtaagcttcagccaacttttcacgcaattc 1810
Query: 240 atccttggaaacgttagctctgtttgggtgcaagacgtcaacgacgaattgctttctggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 atccttggaaacgttagctctgtttgggtgcaagacgtcaacgacgaattgctttctggc 1870
Query: 300 caacaatgggttggagataacctttctggtacggatagtaatagcgtcagactattaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1871 caacaatgggttggagataacctttctggtacggatagtaatagcgtcagactattaaaa 1930
Query: 360 attagcgaggatgaaatatgttagtaaaaaattcatttctaatgcaatttaggtcccaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 attagcgaggatgaaatatgttagtaaaaaattcatttctaatgcaatttaggtcccaga 1990
Query: 420 tgttcatttaaatcagtgattggagagacttctacattattggctctgtttttacatgtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 tgttcatttaaatcagtgattggagagacttctacattattggctctgtttttacatgtg 2050
Query: 480 catatcaagatggctcattcatacaaatttcctttcagacacagagatttcaaatactgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 catatcaagatggctcattcatacaaatttcctttcagacacagagatttcaaatactgc 2110
Query: 540 ctgattattacactgctggtagccaaggttcgtccactgtgaacggtaaaatactaatta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 ctgattattacactgctggtagccaaggttcgtccactgtgaacggtaaaatactaatta 2170
Query: 600 ttcctgtattctcattctctctgtaagttcataataggttgtttccatttttgattcaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2171 ttcctgtattctcattctctctgtaagttcataataggttgtttccatttttgattcaat 2230
Query: 660 acgacgataatgcattggtcatcaaataacttgacttaaatcctgcgatgcttacacgca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2231 acgacgataatgcattggtcatcaaataacttgacttaaatcctgcgatgcttacacgca 2290
Query: 720 agtatctgaatccaaactactgagaatatcacttgaagtagtaatccgataacgtagtct 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2291 agtatctgaatccaaactactgagaatatcacttgaagtagtaatccgataacgta-tct 2349
Query: 780 tttkcgtttgagttctgtccttccataaattcatttattggtcatattttgtta 833
||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2350 ttt-cgtttgagttctgtccttccataaattc-tttattggtcatattttgtta 2401
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8014
Number of Sequences: 1807
Number of extensions: 8014
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 1052
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1036
effective length of database: 10,329,639
effective search space: 10701506004
effective search space used: 10701506004
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)